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View Structure Prediction Details

Protein: NLTL5_ARATH
Organism: Arabidopsis thaliana
Length: 182 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NLTL5_ARATH.

Description E-value Query
Range
Subject
Range
gi|21618136 - gi|21618136|gb|AAM67186.1| nonspecific lipid-transfer protein-like protein [Arabidopsis thaliana]
117.0 [0..1] [182..1]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATHSSFTAT TPLFLIVLLS LSSVSVLGAS HHHATAPAPS VDCSTLILNM ADCLSFVSSG  60
   61 GTVAKPEGTC CSGLKTVLKA DSQCLCEAFK SSASLGVTLN ITKASTLPAA CKLHAPSIAT 120
  121 CGLSVAPSTA PGLAPGVAAA GPETAGFLAP NPSSGNDGSS LIPTSFTTVL SAVLFVLFFS 180
  181 SA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.69897
Match: 1be2A
Description: LIPID TRANSFER PROTEIN COMPLEXED WITH PALMITATE, NMR, 10 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle