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View Structure Prediction Details

Protein: gi|20147283, gi|...
Organism: Arabidopsis thaliana
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20147283, gi|....

Description E-value Query
Range
Subject
Range
gi|82400132 - gi|82400132|gb|ABB72805.1| Per1-like family protein [Solanum tuberosum]
446.0 [0..16] [343..15]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARNLPWVLL IIVVSCLVST LEASEGDSDS LYKSCVDQCQ KTGCVGDTCF QHCKFSADGK  60
   61 AIDGPWYMQE PLYLRWKQWD CQSDCQYECM MTREEERKRN GERPTKYFGK WPLKHVYGIQ 120
  121 EPVSVAFSAL DLAMQFQGWV SYFILVYYKL PLQPNRKTYY EYNGIVHIYA IIVMNSLFWS 180
  181 SICHSRDV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [189-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELTERLDYSS ATVLAGFSLI LAILRSFSIQ DQSVKIMVTA PILAVVATHI LYLNFYNLDE  60
   61 GLHWKVIFGI GGIELVVWGL WAALTSHPSK WKLRAFLISS ILTLCLRMFD FPPYKGYIDA 120
  121 HALWRGAGIP LSYLWWSFVC DDAVFRTTVN LKKSK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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