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View Structure Prediction Details

Protein: PT314_ARATH
Organism: Arabidopsis thaliana
Length: 340 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PT314_ARATH.

Description E-value Query
Range
Subject
Range
gi|83767208 - gi|83767208|dbj|BAE57347.1| unnamed protein product [Aspergillus oryzae]
gi|169769759 - gi|169769759|ref|XP_001819349.1| hypothetical protein [Aspergillus oryzae RIB40]
152.0 [0..4] [340..171]

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Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRSKGFMR AEFVTYAYIL LYIALSSGQI FFNKWVLSSK EINFPYPLGL TLLHMIFSSV  60
   61 LCFLLTKVLK IVKVEEGMTL EIYVTSVIPI GAMFAMTLWL GNTAYLYISV AFAQMLKAIM 120
  121 PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.02
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #2
Region A:
Residues: [161-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INWIGVVYQM GGVVGEALRL IFMELLVKRK GIKLNPISLM YYVSPCSAIC LFVPWIFLEK  60
   61 SKIDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL 120
  121 FADTKLTIIN LFGYAIAIAG VAAYNNHKLK KEASKVVTTE TPGDAESIPL VSQGNTNTER 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 53.244125
Match: PF03151.7
Description: No description for PF03151.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle