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View Structure Prediction Details

Protein: PGMC1_ARATH
Organism: Arabidopsis thaliana
Length: 583 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGMC1_ARATH.

Description E-value Query
Range
Subject
Range
PGMC2_ARATH - Probable phosphoglucomutase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At1g70730 PE=2 SV=1
547.0 [0..2] [583..3]

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Predicted Domain #1
Region A:
Residues: [1-583]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFKVSTVST SPIDGQKPGT SGLRKKVKVF KQPNYLENFV QATFNALTAE KVKGATLVVS  60
   61 GDGRYYSKDA VQIIIKMAAA NGVRRVWVGK NTLLSTPAVS AVIRERSGAD GSKATGAFIL 120
  121 TASHNPGGPT EDFGIKYNME NGGPAPESIT DKIYENTKTI KEYPIAQDLP NVDISAVGVT 180
  181 SFEGPEGKFD VEVFDPADDY VKLMKSIFDF EAIRKLLSSP KFTFCYDALH GVAGAYAHRI 240
  241 FVEELGAQES ALLNCTPKED FGGGHPDPNL TYAKELVARM GLGKSDTGGE PPEFGAAADG 300
  301 DADRNMILGK RFFVTPSDSV AIIAANAIGA IPYFSSGLKG VARSMPTSAA LDVVAKSLNL 360
  361 KFFEVPTGWK FFGNLMDAGM CSVCGEESFG TGSDHIREKD GIWAVLAWMS ILAHKNKGNI 420
  421 DGNAKLVSVE DIVRQHWATY GRHYYTRYDY ENVDAGKAKE LMEHLVKLQS SIPEVNKIVK 480
  481 GIRSDVASVA SADEFEYKDP VDGSISKHQG IRYLFEDGSR LVFRLSGTGS EGATIRLYIE 540
  541 QYEKDASKTG RESQEALSPL VDLALKLSKM EEFTGRSAPT VIT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 147.0
Match: 1c47A
Description: Phosphoglucomutase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle