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View Structure Prediction Details

Protein: Y5713_ARATH
Organism: Arabidopsis thaliana
Length: 426 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y5713_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593427 - gi|21593427|gb|AAM65394.1| unknown [Arabidopsis thaliana]
468.0 [0..1] [417..1]

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Predicted Domain #1
Region A:
Residues: [1-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSACINGLCR AVTVSLLLLL LSFSFSSACS NGNCQLLDSC SSATDCVSGL YCGDCPAVGR  60
   61 SKPVCTRGQA TSPTSIINGL PFNKYTWLMT HNAFSNANAP LLPGVERITF YNQEDTITNQ 120
  121 LQNGVRGLML DMYDFNNDIW LCHSLRGQCF NFTAFQPAIN ILREVEAFLS QNPTEIVTII 180
  181 IEDYVHRPKG LSTLFANAGL DKYWFPVSKM PRKGEDWPTV TDMVQENHRL LVFTSVAAKE 240
  241 DEEGVAYQWR YMVENESGDP GVKRGSCPNR KESQPLNSKS SSLFLMNYFP TYPVEKDACK 300
  301 EHSAPLAEMV GTCLKSGGNR MPNFLAVNFY MRSDGGGVFE ILDRMNGPVL CGC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.522879
Match: 7ptdA
Description: PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C MUTANT R163K
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.693222330136336 bayes_pls_golite062009
hydrolase activity 0.17768980721334 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.05056572092175 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.0304825793447705 bayes_pls_golite062009
phosphoric diester hydrolase activity 0.01534375493934 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [354-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETLSACQPGA AYGSCKNVTV QTRTPSMDST AGSNSGGSYS GSVQFSRSLA SVAQLNNIVV  60
   61 FCFSLLPLLI FLL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle