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View Structure Prediction Details

Protein: gi|18413291, gi|...
Organism: Arabidopsis thaliana
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18413291, gi|....

Description E-value Query
Range
Subject
Range
gi|215740552, gi... - gi|215740552|dbj|BAG97208.1| unnamed protein product [Oryza sativa Japonica Group], gi|115458578|ref...
187.0 [0..9] [346..5]

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Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSSNLNPL REDTSEEHLE PIEAPASVFA ARPLRPPSTN SSEKYSPVEW KSYFDKEDDI  60
   61 SITGSDDVFH VYMAGNEGPV VFCLHGGGYS GLSFSIVASK IKEKARVVAM DLRGHGKSVS 120
  121 ENELELSLET MSNDVLAVIK ELYGDSPPAI VLVGHSMGGS VAVQVAANKT LPSLAGLVVV 180
  181 DVVEGTAISS LIHMQKILSN RMQHFPSIEK AIEYSVRGGS LRNIDSARVS IPTTLKYDDS 240
  241 KHCYVYRTRL EETEQYWKGW YDGLSEKFLS SPVPKLLLLA GTDRLDRTLT IGQMQGKFQM 300
  301 IVVKHTGHAI QEDVPEEFAN LVLNFISRNR IGPHGVEIPG MWKPSQQTKT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.522879
Match: 1s8oA
Description: Human soluble Epoxide Hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.36321860321357 bayes_pls_golite062009
hydrolase activity 1.1444670166202 bayes_pls_golite062009
binding 0.386006007682309 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle