| Protein: | AI5L6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 454 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AI5L6_ARATH.
| Description | E-value | Query Range |
Subject Range |
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287.0 | [0..1] | [428..1] |
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224.0 | [0..5] | [454..1] |
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223.0 | [0..5] | [454..1] |
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222.0 | [0..1] | [454..1] |
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221.0 | [0..5] | [454..1] |
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218.0 | [0..1] | [454..1] |
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213.0 | [0..1] | [454..56] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MGSRLNFKSF VDGVSEQQPT VGTSLPLTRQ NSVFSLTFDE FQNSWGGGIG KDFGSMNMDE 60
61 LLKNIWTAEE SHSMMGNNTS YTNISNG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.518 | N/A | N/A | a.230.1 | Description not found. |
| View | Download | 0.484 | N/A | N/A | a.283.1 | Description not found. |
| View | Download | 0.416 | N/A | N/A | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.355 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.342 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.340 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.330 | N/A | N/A | d.120.1 | Cytochrome b5 |
| View | Download | 0.322 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.304 | N/A | N/A | d.120.1 | Cytochrome b5 |
| View | Download | 0.284 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
|
Region A: Residues: [88-357] |
1 11 21 31 41 51
| | | | | |
1 NSGNTVINGG GNNIGGLAVG VGGESGGFFT GGSLQRQGSL TLPRTISQKR VDDVWKELMK 60
61 EDDIGNGVVN GGTSGIPQRQ QTLGEMTLEE FLVRAGVVRE EPQPVESVTN FNGGFYGFGS 120
121 NGGLGTASNG FVANQPQDLS GNGVAVRQDL LTAQTQPLQM QQPQMVQQPQ MVQQPQQLIQ 180
181 TQERPFPKQT TIAFSNTVDV VNRSQPATQC QEVKPSILGI HNHPMNNNLL QAVDFKTGVT 240
241 VAAVSPGSQM SPDLTPKSAL DASLSPVPYM
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| Detection Method: | |
| Confidence: | 3.30103 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [358-454] |
1 11 21 31 41 51
| | | | | |
1 FGRVRKTGAV LEKVIERRQK RMIKNRESAA RSRARKQAYT MELEAEIAQL KELNEELQKK 60
61 QVEIMEKQKN QLLEPLRQPW GMGCKRQCLR RTLTGPW
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| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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