| Protein: | DMS3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 420 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DMS3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
678.0 | [0..1] | [414..1] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MYPTGQQISF QTTPLNVQDP TRMMNLDQSS PVARNETQNG GGIAHAEFAM FNSKRLESDL 60
61 EAMGNKIKQH EDNLKFLKSQ K
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [82-420] |
1 11 21 31 41 51
| | | | | |
1 NKMDEAIVDL QVHMSKLNSS PTPRSENSDN SLQGEDINAQ ILRHENSAAG VLSLVETLHG 60
61 AQASQLMLTK GVVGVVAKLG KVNDENLSQI LSNYLGTRSM LAVVCRNYES VTALEAYDNH 120
121 GNIDINAGLH CLGSSIGREI GDSFDAICLE NLRPYVGQHI ADDLQRRLDL LKPKLPNGEC 180
181 PPGFLGFAVN MIQIDPAYLL CVTSYGYGLR ETLFYNLFSR LQVYKTRADM ISALPCISDG 240
241 AVSLDGGIIR KTGIFNLGNR DEVNVRFAKP TASRTMDNYS EAEKKMKELK WKKEKTLEDI 300
301 KREQVLREHA VFNFGKKKEE FVRCLAQSSC TNQPMNTPR
|
| Detection Method: | |
| Confidence: | 4.21 |
| Match: | 1gxlA |
| Description: | Smc hinge domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.225375777463061 | bayes_pls_golite062009 |
