YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|18425050, gi|...
Organism: Arabidopsis thaliana
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18425050, gi|....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
410.0 [0..4] [330..1271]

Back

Predicted Domain #1
Region A:
Residues: [1-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEFTEREDR VSLELSEEII QSMEPGAVFR DYNCRISSID FHKTSTCMVT ASDDDSIRLY  60
   61 DVASATCLKT INSKKYGVDL VCFTSHPTTV IYSSRNGWDD SLRLLSLHDN KYLRYFKGHH 120
  121 DRVVSLSLCS GGECFISGSL DRTVLLWDQR VEKCQGLLRV QGRPAAAYDD QGLIFAIAFG 180
  181 GYIRMFDARM YEKGPFEIFS VGGDLSEANV VKFSNDGRLM LLTTMDGFIH VLDSFRGTLL 240
  241 STFSVKPVAG ESTLDAAFSP EGMFVVSGSG DGSTHAWGVR SGKQVHSWMG LGSEPPVIKW 300
  301 GPGSPMFVTG SSELAFVIPD LSKLPAYAIR K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.221849
Match: 2gnqA
Description: No description for 2gnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle