| Protein: | VHAA3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 821 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for VHAA3_ARATH.
|
Region A: Residues: [1-336] |
1 11 21 31 41 51
| | | | | |
1 MAESGGGGGC CPPMDLMRSE TMQLVQLIVP MESAHLTVSY LGDLGLVQFK DLNSEKSPFQ 60
61 RTYAAQIKRC GEMARKIRFF RDQMSKAGVP AKEMQGKEND IDLDDVEVKL GELEAELVEI 120
121 NANNDKLQRS YNELMEYKLV LQKAGEFFSS AHRSAADQQR ETESQQAGED LLESPLLQEE 180
181 KSIDSTKQVK LGFLTGLVPR EKSMVFERIL FRATRGNIFI RQTVIEEPVI DPNSGEKAEK 240
241 NVFVVFYSGE RAKSKILKIC EAFGANRYPF SEDLGRQAQM ITEVSGRLSE LKTTIDAGLG 300
301 QRNILLQTIG DKFELWNLKV RKEKAIYHTL NMLSLD
|
| Detection Method: |  |
| Confidence: | 24.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [337-406] |
1 11 21 31 41 51
| | | | | |
1 VTKKCLVAEG WSPVFASREI QDALQRAAVD SNSQVGSIFQ VLRTKESPPT YFRTNKFTSA 60
61 IQEIVDAYGV
|
| Detection Method: | |
| Confidence: | 4.09691 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
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|
Region A: Residues: [407-671] |
1 11 21 31 41 51
| | | | | |
1 AKYQEANPGV FTIVTFPFLF AVMFGDWGHG ICILLATMYL ILKEKKLASQ KLGDIMEMAF 60
61 GGRYVILMMS LFSIYTGLIY NEFFSIPFPL FAPSAYDCRD VSCSEATTIG LIKVRDTYPF 120
121 GLDPVWHGSR SELPFLNSLK MKMSILLGVS QMNLGIIMSY FNARFFKSSV NIWFQFIPQM 180
181 IFLNSLFGYL SVLIIIKWCT GSQADLYHVM IYMFLSPMDE LGENQLFPHQ KTLQLVLLFL 240
241 ALVSVPCMLL PKPFILKKQH EARHQ
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| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [672-821] |
1 11 21 31 41 51
| | | | | |
1 GQAYAPLDET DESLHVETNG GGSHGHEEFE FSEIFVHQLI HTIEFVLGAV SNTASYLRLW 60
61 ALSLAHSELS SVFYEKVLLL AWGYNNPLIL IVGVLVFIFA TVGVLLVMET LSAFLHALRL 120
121 HWVEFQNKFY EGDGYKFAPF TFIFTANEDE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
