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View Structure Prediction Details

Protein: Y3514_ARATH
Organism: Arabidopsis thaliana
Length: 337 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y3514_ARATH.

Description E-value Query
Range
Subject
Range
gi|11994503 - gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
256.0 [0..1] [337..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAFSAFRV SLSRISPFRD TRFSYPATLA LAHTKRIMCN SSHSVSPSPS PSDFSSSSSS  60
   61 SSSSPSTFSL METSENARWR PMCLYYTHGK CTKMDDPAHL EIFNHDCSKE LRVAAADLER 120
  121 KKS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.969
Match: 1e44B
Description: Ribonuclease domain of colicin E3
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [124-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEFNFFLVID LEGKVEILEF PILIVDAKTM EVVDLFHRFV RPTKMSEQAI NKYIEGKYGE  60
   61 LGVDRVWHDT AIPFKQVVEE FEVWLAEHDL WDKDTDWGLN DAAFVTCGNW DIKTKIPEQC 120
  121 VVSNINLPPY FMEWINLKDV YLNFYGREAR GMVSMMRQCG IKLMGSHHLG IDDTKNITRV 180
  181 VQRMLSEGAV LKLTARRSKS NMRNVEFLFK NRIK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.0
Match: 1zbuA
Description: No description for 1zbuA was found.

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