| Protein: | LGUC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 350 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LGUC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
314.0 | [0..1] | [350..1] |
|
|
244.0 | [0..71] | [350..11] |
|
|
241.0 | [0..80] | [350..15] |
|
|
241.0 | [0..80] | [350..14] |
|
|
240.0 | [0..67] | [350..1] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MVRIIPMAAS SIRPSLACFS DSPRFPISLL SRNLSRTLHV PQSQLFGLTS HKLLRRSVNC 60
61 LGVAESGKAA QATTQDDLLT WVKN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.816 | a.28.3 | Retrovirus capsid protein C-terminal domain |
|
Region A: Residues: [85-212] |
1 11 21 31 41 51
| | | | | |
1 DKRRMLHVVY RVGDMDRTIK FYTECLGMKL LRKRDIPEEK YTNAFLGYGP EDSHFVIELT 60
61 YNYGVDKYDI GAGFGHFGIA VDDVAKTVEL VKAKGGKVSR EPGPVKGGKT VIAFIEDPDG 120
121 YKFELLER
|
| Detection Method: | |
| Confidence: | 33.0 |
| Match: | 1f9zA |
| Description: | Glyoxalase I (lactoylglutathione lyase) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [213-350] |
1 11 21 31 41 51
| | | | | |
1 GPTPEPLCQV MLRVGDLDRA IKFYEKAFGM ELLRTRDNPE YKYTIAMMGY GPEDKFPVLE 60
61 LTYNYGVTEY DKGNAYAQIA IGTDDVYKTA EAIKLFGGKI TREPGPLPGI STKITACLDP 120
121 DGWKSVFVDN IDFLKELE
|
| Detection Method: | |
| Confidence: | 18.09691 |
| Match: | 2p25A |
| Description: | No description for 2p25A was found. |
