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View Structure Prediction Details

Protein: NHX1_ARATH
Organism: Arabidopsis thaliana
Length: 538 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NHX1_ARATH.

Description E-value Query
Range
Subject
Range
gi|51094440 - gi|51094440|gb|AAT95387.1| sodium proton exchanger [Arabidopsis thaliana]
365.0 [0..1] [538..1]

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Predicted Domain #1
Region A:
Residues: [1-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDSLVSKLP SLSTSDHASV VALNLFVALL CACIVLGHLL EENRWMNESI TALLIGLGTG  60
   61 VTILLISKGK SSHLLVFSED LFFIYLLPPI IFNAGFQVKK KQFFRNFVTI MLFGAVGTII 120
  121 SCTIISLGVT QFFKKLDIGT FDLGDYLAIG AIFAATDSVC TLQVLNQDET PLLYSLVFGE 180
  181 GVVNDATSVV VFNAIQSFDL T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [202-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HLNHEAAFHL LGNFLYLFLL STLLGAATGL ISAYVIKKLY FGRHSTDREV ALMMLMAYLS  60
   61 YMLAELFDLS GILTVFFCGI VMSHYTWHNV TESSRITTKH TFATLSFLAE TFIFLYVGMD 120
  121 ALDIDKWRSV SDTPGTSIAV SSILMGLVMV GRAAFVFPLS FLSNLAKKN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [371-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSEKINFNMQ VVIWWSGLMR GAVSMALAYN KFTRAGHTDV RGNAIMITST ITVCLFSTVV  60
   61 FGMLTKPLIS YLLPHQNATT SMLSDDNTPK SIHIPLLDQD SFIEPSGNHN VPRPDSIRGF 120
  121 LTRPTRTVHY YWRQFDDSFM RPVFGGRGFV PFVPGSPTER NPPDLSKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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