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View Structure Prediction Details

Protein: RBOHB_ORYSI
Organism: Oryza sativa Indica Group
Length: 905 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for RBOHB_ORYSI.

Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLEAGMVA AATDQGNSTR SQDDAATLIP NSGNLGSSNR STKTARFKDD DELVEITLDV  60
   61 QRDSVAIQEV R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.09691
Match: 3c0gA
Description: No description for 3c0gA was found.

Predicted Domain #2
Region A:
Residues: [72-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVDEGGSGHG TGFDGLPLVS PSSKSGKLTS KLRQVTNGLK MKSSSRKAPS PQAQQSAKRV  60
   61 RKRLDRTKSS AAVALKGLQF VTAKVGNDGW AAVEKRFNQL QVDGVLLRSR FGKCIGMDGS 120
  121 DEFAVQMFDS LARKRGIVKQ VLTKDELKDF YEQLTDQGFD NRLRTFFDMV DKNADGRLTA 180
  181 EEVKEIIALS ASANKLSKIK ERADEYTALI MEELDPTNLG YIEMEDLEAL LLQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.30103
Match: 2julA
Description: No description for 2julA was found.

Predicted Domain #3
Region A:
Residues: [305-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPSEAAARST TTHSSKLSKA LSMKLASNKE MSPVRHYWQQ FMYFLEENWK RSWVMTLWIS  60
   61 ICIALFIWKF IQYRNRAVFG IMGYCVTTAK GAAETLKFNM ALVLLPVCRN TITWIRSKTQ 120
  121 VGAVVPFNDN INFHKVIAAG VAVGVAL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [452-905]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HAGAHLTCDF PRLLHASDAQ YELMKPFFGE KRPPNYWWFV KGTEGWTGVV MVVLMAIAFT  60
   61 LAQPWFRRNK LKDSNPLKKM TGFNAFWFTH HLFVIVYTLL FVHGTCLYLS RKWYKKTTWM 120
  121 YLAVPVVLYV SERILRLFRS HDAVGIQKVA VYPGNVLALY MSKPPGFRYR SGQYIFIKCT 180
  181 AVSPYEWHPF SITSAPGDDY LSVHIRTRGD WTSRLRTVFS EACRPPTEGE SGLLRADLSK 240
  241 GITDEKARFP KLLVDGPYGA PAQDYREYDV LLLIGLGIGA TPLISIVKDV LNHIQGEGSV 300
  301 GTTEPESSSK AKKKPFMTKR AYFYWVTREE GSFEWFRGVM NEVSEKDKDG VIELHNHCSS 360
  361 VYQEGDARSA LIVMLQELQH AKKGVDILSG TSVKTHFARP NWRSVFKKVA VSHENQRVGV 420
  421 FYCGEPVLVP QLRQLSADFT HKTNTRFDFH KENF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.09691
Match: 1cqxA
Description: Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle