YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: IL13_PIG
Organism: Sus scrofa
Length: 131 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IL13_PIG.

Description E-value Query
Range		 Subject
Range
gi|110559067 - gi|110559067|gb|ABG75889.1| IL13 [Macaca fascicularis]
 236.0 [0..1] [131..1]
IL13_MACMU - Interleukin-13 OS=Macaca mulatta GN=IL13 PE=2 SV=1
 235.0 [0..1] [131..1]
gi|67944395 - gi|67944395|gb|AAY83833.1| interleukin-13 [Bubalus bubalis]
 227.0 [0..1] [130..1]
IL13_BOVIN - Interleukin-13 precursor - Bos taurus (Bovine)
 223.0 [0..1] [130..1]
gi|116138167 - gi|116138167|gb|AAH96141.2| Interleukin 13 [Homo sapiens]
 223.0 [0..1] [131..1]
gi|60828039, gi|... - gi|61368425|gb|AAX43177.1| interleukin 13 [synthetic construct], gi|60828039|gb|AAX36825.1| interleu...
 220.0 [0..1] [131..1]
IL13_CAMBA - Interleukin-13 OS=Camelus bactrianus GN=IL13 PE=2 SV=1
IL13_LAMGL - Interleukin-13 OS=Lama glama GN=IL13 PE=2 SV=1
 219.0 [0..1] [130..1]

Back

Predicted Domain #1
Region A:
Residues: [1-131] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALWLTLVIA LTCFGGLASP GPVPPHSTAL KELIEELVNI TQNQKTPLCN GSMVWSVNLT  60
   61 TSMQYCAALE SLINISDCSA IQKTQRMLSA LCSHKPPSEQ VPGKHIRDTK IEVAQFVKDL 120
  121 LKHLRMIFRH G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.69897
Match: 1ga3A
Description: Interleukin-13 (IL-13)
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle