YRC Public Data Repository - Protein Structure Prediction

Protein:	UTS2_PIG
Organism:	Sus scrofa
Length:	121 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTS2_PIG.

Description	E-value	Query Range	Subject Range
gi\|61859014 - gi\|61859014\|ref\|XP_582447.1\| PREDICTED: similar to urotensin II transcript [Bos taurus]	190.0	[0..1]	[121..1]
UTS2_MACMU - Urotensin-2 OS=Macaca mulatta GN=UTS2 PE=2 SV=1	173.0	[0..1]	[121..1]
UTS2_MOUSE - Urotensin-2 OS=Mus musculus GN=Uts2 PE=2 SV=1	173.0	[0..5]	[121..6]
UTS2_RAT - Urotensin-2 OS=Rattus norvegicus GN=Uts2 PE=2 SV=1	170.0	[0..5]	[121..6]
gi\|114552295 - gi\|114552295\|ref\|XP_001157678.1\| PREDICTED: urotensin 2 isoform 2 [Pan troglodytes] UTS2 - urotensin 2	170.0	[0..1]	[121..1]
gi\|46195848, gi\|... - gi\|46195848\|ref\|NP_996873.1\| urotensin 2 [Gallus gallus], gi\|45551420\|gb\|AAS68021.1\| preprourotensin...	165.0	[0..1]	[121..1]
gi\|118344610, gi... - gi\|89331013\|emb\|CAI63878.1\| urotensin II precursor [Takifugu rubripes], gi\|87116235\|emb\|CAI53670.1\| ...	152.0	[0..2]	[121..4]
UTS2G_CYPCA - Prepro-urotensin II-gamma OS=Cyprinus carpio PE=1 SV=1	151.0	[0..17]	[121..19]

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Predicted Domain #1

Region A:
Residues: [1-121]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLVPCLLL LGCLGLLFAL PVPDSRKEPL PFSAPEDVRS AWDELERASL LQMLPETPGA  60
   61 EAGEDLREAD AGMDIFYPRG EMRKAFSGQD PNIFLSHLLA RIKKPYKKRG PPSECFWKYC 120
  121 V

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits