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View Structure Prediction Details

Protein: gi|22326737, gi|...
Organism: Arabidopsis thaliana
Length: 880 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|22326737, gi|....

Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKMKHLLRK LHIGGSSGVG GGFADHHRLD DSTRPMIDPS PILSTSPSPA STSSVSSSGF  60
   61 GNASTTMPRL DTFEPVGRDL TAVDGVDFNL MEEEYQVQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAMAISVSDP DPRENADTAQ LDAAKRISLG VSAPVTDADS AVDFLSLRYW GHKVINYDQK  60
   61 VRDGFYDVYG ITSNSLSQGK MPLLVDLQAI SISDNVDYEV ILVNRLIDPE LQELERRVFA 120
  121 LASECPDFAP GQVSSDLTQK IANIVVEQMG GPVENADEAL RRWMLRSYEL RNSLNTTILP 180
  181 LGRVNVGLAR HRALLFKVLA DRINLPCMLV K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [310-880]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSYYTGTDDG AVNLIKLDDK SEYIIDLMGA PGALIPSEVP SSFLPVSCTD TRVFPENLDS  60
   61 LQHSSPVLEK EIETPAFSVS KEADSRSGMV ANFFTGNQEE NSDRCAVEKH QTERFEHDFG 120
  121 KLMHSQQISG ENMPPFSGKP TCAQKVKVKN VSKYVISAAK NPEFAQKLHA VLLESGASPP 180
  181 PDLFMDINPH NLRGKNLLQE LRQESSNSMV SGIPCYPEKV AEQLRESERN PTAESYQQSV 240
  241 EVDLSMKRNF DLDNTGKASS SENMEVGTAD GESAVCDSHD QGINPLLGEA AKWEIMWEDL 300
  301 QIGERIGIGS YGEVYRAEWN GTEVAVKKFL DQDFSGDALT QFKSEIEIML RLRHPNVVLF 360
  361 MGAVTRPPNF SILTEFLPRG SLYRLLHRPN HQLDEKRRMR MALDVAKGMN YLHTSHPTVV 420
  421 HRDLKSPNLL VDKNWVVKVC DFGLSRMKHH TYLSSKSTAG TPEWMAPEVL RNEPANEKCD 480
  481 VYSFGVILWE LATSRVPWKG LNPMQVVGAV GFQNRRLEIP DDIDLTVAQI IRECWQTEPH 540
  541 LRPSFTQLMQ SLKRLQGLNI SNRANTSESL M

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 2h8hA
Description: No description for 2h8hA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle