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View Structure Prediction Details

Protein: B3GTG_ARATH
Organism: Arabidopsis thaliana
Length: 619 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for B3GTG_ARATH.

Description E-value Query
Range
Subject
Range
gi|34597313 - gi|34597313|gb|AAQ77231.1| putative beta 1, 3 galactosyltransferase [Arabidopsis thaliana]
568.0 [0..1] [619..1]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQFMSVVRF KFGFTSVRMR DWSVGVSIMV LTLIFIIRYE QSDHTHTVDD SSIEGESVHE  60
   61 PAKKPHFMTL EDLDYLFSNK SFFGEEEVSN GMLVWSRMRP FLERPDALPE TAQGIEEATL 120
  121 AMKGLVLEIN REKRAYSSGM VSKEIRRICP DFVTA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FDKDLSGLSH VLLELPCGLI EDSSITLVGI PDEHSSSFQI QLVGSGLSGE TRRPIILRYN  60
   61 VNFSKPSIVQ NTWTEKLGWG NEERCQYHGS LKNHLVDELP LCNKQTGRII SEKSSNDDAT 120
  121 MELSLSNANF PFLKGSPFTA ALWFGLEGFH MTINGRHETS FAYREKLEPW LVSAVKVSGG 180
  181 LKILSVLATR LPIPDDHASL IIEEKLKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.39794
Match: 2eakA
Description: No description for 2eakA was found.

Predicted Domain #3
Region A:
Residues: [364-619]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSLSGTRIEL LVGVFSTGNN FKRRMALRRS WMQYEAVRSG KVAVRFLIGL HTNEKVNLEM  60
   61 WRESKAYGDI QFMPFVDYYG LLSLKTVALC ILGTKVIPAK YIMKTDDDAF VRIDELLSSL 120
  121 EERPSSALLY GLISFDSSPD REQGSKWFIP KEEWPLDSYP PWAHGPGYII SHDIAKFVVK 180
  181 GHRQRDLGLF KLEDVAMGIW IQQFNQTIKR VKYINDKRFH NSDCKSNYIL VHYQTPRLIL 240
  241 CLWEKLQKEN QSICCE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle