| Protein: | gi|30683293, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 312 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30683293, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
438.0 | [0..1] | [312..1] |
|
|
390.0 | [0..1] | [308..45] |
|
|
386.0 | [0..4] | [312..1] |
|
|
304.0 | [0..22] | [294..15] |
|
|
298.0 | [0..22] | [294..15] |
|
|
297.0 | [0..22] | [294..15] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MGEMIVSMDQ DIRLDTTRAR LSNLLKRHRE LSDRLTRDSD KTMLDRLNKE FEAARRSQSQ 60
61 EVFLDGEEWN DGLLATLRER VHMEADRKAD NGNAGFSLVC HPEERITYRV GNKVICCLD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.825 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.805 | N/A | N/A | a.7.14 | Description not found. |
| View | Download | 0.789 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.789 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.757 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.757 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.742 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.714 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.713 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
|
Region A: Residues: [120-215] |
1 11 21 31 41 51
| | | | | |
1 GSRIGIQFET STAGETYEVY HCVLESKSFL EKMIVLEHTI PFFLPLSDLE NDLLFSNAKK 60
61 FIDNVGDLLQ AYVDRKEQVR LIKELFGHQI SEIYHS
|
| Detection Method: | |
| Confidence: | 28.420216 |
| Match: | PF09496.1 |
| Description: | No description for PF09496.1 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.928 | N/A | N/A | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.916 | N/A | N/A | a.8.4 | Description not found. |
| View | Download | 0.833 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.833 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.819 | N/A | N/A | a.8.4 | Description not found. |
| View | Download | 0.746 | N/A | N/A | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.716 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.688 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.681 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.661 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
|
Region A: Residues: [216-312] |
1 11 21 31 41 51
| | | | | |
1 LPYHMIEFSM DDCDCKFVVS LRYGDLLCEL PTKVRILVWP MHHLSKKQCT SPGSPAIPVR 60
61 LPFAEDAFRI QSLPEAYAEI MPNMPNEIRQ LFQTSPS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.683 | a.24.3 | Cytochromes |
| View | Download | 0.632 | a.46.1 | Methionine synthase domain |
| View | Download | 0.618 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.612 | a.46.1 | Methionine synthase domain |
| View | Download | 0.583 | a.1.1 | Globin-like |
| View | Download | 0.545 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.524 | a.7.1 | Spectrin repeat |
| View | Download | 0.510 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.494 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
