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View Structure Prediction Details

Protein: ACR7_ARATH
Organism: Arabidopsis thaliana
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACR7_ARATH.

Description E-value Query
Range
Subject
Range
gi|20466646 - gi|20466646|gb|AAM20640.1| translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
372.0 [0..1] [449..1]
gi|92872970, gi|... - gi|92892048|gb|ABE91066.1| protein F5O11.14 [imported] - Arabidopsis thaliana [Medicago truncatula],...
324.0 [0..1] [447..1]

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Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSDCSNEY EKLVVRMNMP RVVIDNGVCP NSTVVKIDSA RSPGILLESV QLLTDMNLWI  60
   61 KKAYISSDGK WNMDVFHVSD LNGDKLTDEN LIRYIEKSIE TSHYCKTEGY TGLTALELTG 120
  121 TDRVGLLSEV FAVLADLECD VVEAKAWTHN GRIASMIYVK DGNSGTPIDG DSDRVQRVEG 180
  181 QLRNLLKADD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.30103
Match: 1u8sA
Description: Crystal structure of putative glycine cleavage system transcriptional repressor
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [191-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYQNDTRTCV SYGGNTHMER RLHQRMFMDR DYEKKFDIEK SPIVSVQNLP KRGYSVVNLQ  60
   61 CKDRMKLLFD VVCTLTDMAY IVFHAAIRTV GETAFLEFYV RHSDGHPVSS EPERQRLIQC 120
  121 LQAAIERRTV KGVRLELCTA DRPGLLAEVT RILRENGLNI ARAEISTKDS IARNVFYVTD 180
  181 ANGNLIDPEI IKSIRE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 2nyiA
Description: No description for 2nyiA was found.

Predicted Domain #3
Region A:
Residues: [387-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KIGIDDLSVK EPFPISCREA VEKEQHIEPQ DHQGRYGGGT VLVSLGSLVM RNLYHLGLIK  60
   61 SYF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle