| Protein: | SURF1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 354 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SURF1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
269.0 | [0..1] | [351..1] |
|
|
252.0 | [0..27] | [350..450] |
|
|
238.0 | [0..27] | [350..23] |
|
|
237.0 | [0..72] | [352..54] |
|
Region A: Residues: [1-198] |
1 11 21 31 41 51
| | | | | |
1 MATSLSKILT RSNTKRYWCS TTTSISASPS LPKQFWSRHF SAVADSSSSS SAALGSQSSS 60
61 SAPPQENKRG SKWSQLLLFL PGAITFGLGS WQIVRREEKF KTLEYQQQRL NMEPIKLNID 120
121 HPLDKNLNAL EFRRVSCKGV FDEQRSIYLG PRSRSISGIT ENGFFVITPL MPIPGDLDSM 180
181 QSPILVNRGW VPRSWREK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [199-271] |
1 11 21 31 41 51
| | | | | |
1 SQESAEAEFI ANQSTKAKSP SNEPKSWWKF WSKTPVITKE HISAVKPVEV VGVIRGGENP 60
61 SIFVPSNDPS TGQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.559 | b.122.1 | PUA domain-like |
| View | Download | 0.539 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.520 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.517 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.514 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.498 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.495 | b.1.18 | E set domains |
| View | Download | 0.478 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.477 | d.95.2 | Homing endonucleases |
| View | Download | 0.467 | g.41.3 | Zinc beta-ribbon |
|
Region A: Residues: [272-354] |
1 11 21 31 41 51
| | | | | |
1 WFYVDVPAMA RAVGLPENTI YVEDVHEHVD RSRPYPVPKD INTLIRSKVM PQDHLNYSIT 60
61 WYSLSAAVTF MAYKRLKAKP VRR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.712 | N/A | N/A | a.7.16 | Description not found. |
| View | Download | 0.602 | N/A | N/A | d.101.1 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
| View | Download | 0.567 | N/A | N/A | a.2.15 | Description not found. |
| View | Download | 0.554 | N/A | N/A | a.2.15 | Description not found. |
| View | Download | 0.547 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.512 | N/A | N/A | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.479 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.414 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.412 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.407 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
