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View Structure Prediction Details

Protein: PLA2D_ARATH
Organism: Arabidopsis thaliana
Length: 191 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLA2D_ARATH.

Description E-value Query
Range
Subject
Range
PLA2C_ARATH - Phospholipase A2-gamma OS=Arabidopsis thaliana GN=PLA2-GAMMA PE=1 SV=1
316.0 [0..1] [187..1]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRGGALTHV ALGLTVFLLL AVVHSQEKCS KTCIAQKCNV LGIRYGKYCG IGYFGCPGEP  60
   61 PCDDLDDCCM THDNCVDLKG MTYVDCHKQF QRCVNELKQS IQESNNQKVG FSKECPYSTV 120
  121 IPTVYRGMNY GIFFSGIGNI IIPKKPASAG PVVEVDLARS KADTKDGLGT NQGPQTKDGS 180
  181 KVSVPMNPSP S

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.69
Match: 1gp7A
Description: Snake phospholipase A2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.389307920841874 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle