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View Structure Prediction Details

Protein: NUD21_ARATH
Organism: Arabidopsis thaliana
Length: 198 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUD21_ARATH.

Description E-value Query
Range
Subject
Range
gi|11120797, gi|... - pir||B96762 unknown protein [imported] - Arabidopsis thaliana, gi|11120797|gb|AAG30977.1|AC012396_1...
142.0 [0..22] [198..1]

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Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLFISNFS NLSNLSPTFD NMNMNIPSKK IVPVPTPSEK VVSLVSRTGR DLQRYNTAGY  60
   61 RQVVGCVPYR YKKHGGGEIE VLLISAQKKG KGMLLPKGGW EIDESIEEAA LRETIEEAGV 120
  121 TGQLEESLGK WQYKSKRHTM IHDGHMFPLL VSQQFEIWPE SEFRQRKWVS LSEAIELCQN 180
  181 SWMREALEAF INRKCQTQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.30103
Match: 2fvvA
Description: No description for 2fvvA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.960699420760702 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle