| Protein: | WRK10_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 485 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WRK10_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
282.0 | [0..1] | [485..1] |
|
|
203.0 | [0..1] | [485..1] |
|
|
181.0 | [0..144] | [466..2] |
|
|
181.0 | [0..116] | [469..138] |
|
|
181.0 | [0..51] | [469..35] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MSDFDENFIE MTSYWAPPSS PSPRTILAML EQTDNGLNPI SEIFPQESLP RDHTDQSGQR 60
61 SGLRERLAAR VGFNLPTLNT EENMSPLDAF FRSSNVPNSP VVAISPGFSP SALLHTPNMV 120
121 SDSSQIIPPS SAT
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [134-239] |
1 11 21 31 41 51
| | | | | |
1 NYGPLEMVET SGEDNAAMMM FNNDLPYQPY NVDLPSLEVF DDIATEESFY IPSYEPHVDP 60
61 IGTPLVTSFE SELVDDAHTD IISIEDSESE DGNKDDDDED FQYEDE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.326 | c.9.1 | Barstar (barnase inhibitor) |
| View | Download | 0.304 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.304 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.267 | a.118.8 | TPR-like |
| View | Download | 0.267 | a.118.8 | TPR-like |
| View | Download | 0.238 | d.218.1 | Nucleotidyltransferase |
| View | Download | 0.224 | d.14.1 | Ribosomal protein S5 domain 2-like |
|
Region A: Residues: [240-284] |
1 11 21 31 41 51
| | | | | |
1 DEDQYDQDQD VDEDEEEEKD EDNVALDDPQ PPPPKRRRYE VSNMI
|
| Detection Method: | |
| Confidence: | 2.89 |
| Match: | 1wj2A |
| Description: | Solution Structure of the C-terminal WRKY Domain of AtWRKY4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [285-377] |
1 11 21 31 41 51
| | | | | |
1 GATRTSKTQR IILQMESDED NPNDGYRWRK YGQKVVKGNP NPRSYFKCTN IECRVKKHVE 60
61 RGADNIKLVV TTYDGIHNHP SPPARRSNSS SRN
|
| Detection Method: | |
| Confidence: | 26.522879 |
| Match: | 1wj2A |
| Description: | Solution Structure of the C-terminal WRKY Domain of AtWRKY4 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [378-485] |
1 11 21 31 41 51
| | | | | |
1 RSAGATIPQN QNDRTSRLGR APPTPTPPTP PPSSYTPEEM RPFSSLATEI DLTEVYMTGI 60
61 SMLPNIPVYE NSGFMYQNDE PTMNAMPDGS DVYDGIMERL YFKFGVDM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
