| Protein: | RRN3 |
| Organism: | Homo sapiens |
| Length: | 651 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RRN3.
| Description | E-value | Query Range |
Subject Range |
|
|
946.0 | [0..1] | [651..1] |
|
|
939.0 | [0..1] | [651..1] |
|
|
919.0 | [0..1] | [651..1] |
|
|
909.0 | [0..1] | [651..1] |
|
|
893.0 | [0..1] | [651..1] |
|
|
887.0 | [0..1] | [651..1] |
|
|
812.0 | [0..79] | [651..23] |
|
|
740.0 | [0..34] | [646..1] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MAAPLLHTRL PGDAAASSSA VKKLGASRTG ISNMRALEND FFNSPPRKTV RFGGTVTEVL 60
61 LKYKKGETND FELLKNQLLD PDIKDDQIIN WLLEFRSSIM YLTKDFEQLI SIILRLPWLN 120
121 RSQTVVEEYL AFLGNLVSAQ
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.745 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.647 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.637 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.624 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.622 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.606 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.553 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.546 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.452 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.267 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.238 | N/A | N/A | a.25.1 | Ferritin-like |
|
Region A: Residues: [141-298] |
1 11 21 31 41 51
| | | | | |
1 TVFLRPCLSM IASHFVPPRV IIKEGDVDVS DSDDEDDNLP ANFDTCHRAL QIIARYVPST 60
61 PWFLMPILVE KFPFVRKSER TLECYVHNLL RISVYFPTLR HEILELIIEK LLKLDVNASR 120
121 QGIEDAEETA TQTCGGTDST EGLFNMDEDE ETEHETKA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [299-442] |
1 11 21 31 41 51
| | | | | |
1 GPERLDQMVH PVAERLDILM SLVLSYMKDV CYVDGKVDNG KTKDLYRDLI NIFDKLLLPT 60
61 HASCHVQFFM FYLCSFKLGF AEAFLEHLWK KLQDPSNPAI IRQAAGNYIG SFLARAKFIP 120
121 LITVKSCLDL LVNWLHIYLN NQDS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [443-581] |
1 11 21 31 41 51
| | | | | |
1 GTKAFCDVAL HGPFYSACQA VFYTFVFRHK QLLSGNLKEG LQYLQSLNFE RIVMSQLNPL 60
61 KICLPSVVNF FAAITNKYQL VFCYTIIERN NRQMLPVIRS TAGGDSVQIC TNPLDTFFPF 120
121 DPCVLKRSKK FIDPIYQVW
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [582-651] |
1 11 21 31 41 51
| | | | | |
1 EDMSAEELQE FKKPMKKDIV EDEDDDFLKG EVPQNDTVIG ITPSSFDTHF RSPSSSVGSP 60
61 PVLYMQPSPL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.418 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.418 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.301 | a.251.1 | Description not found. |
| View | Download | 0.299 | a.5.2 | UBA-like |
| View | Download | 0.253 | a.230.1 | Description not found. |
| View | Download | 0.250 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.226 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.226 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.220 | a.39.1 | EF-hand |
