| Protein: | DRM2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 626 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DRM2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
612.0 | [0..2] | [624..23] |
|
|
470.0 | [0..103] | [617..250] |
|
|
450.0 | [0..104] | [625..56] |
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431.0 | [0..104] | [625..48] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF 60
61 SDEVFATLFD MGFPVEMISR AIKETGPN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.706 | a.28.1 | ACP-like |
| View | Download | 0.683 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.682 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.664 | a.64.1 | Saposin |
| View | Download | 0.658 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.637 | a.64.1 | Saposin |
| View | Download | 0.613 | a.28.1 | ACP-like |
| View | Download | 0.478 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
|
Region A: Residues: [89-185] |
1 11 21 31 41 51
| | | | | |
1 VETSVIIDTI SKYSSDCEAG SSKSKAIDHF LAMGFDEEKV VKAIQEHGED NMEAIANALL 60
61 SCPEAKKLPA AVEEEDGIDW SSSDDDTNYT DMLNSDD
|
| Detection Method: | |
| Confidence: | 2.73 |
| Match: | 1vekA |
| Description: | Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [186-497] |
1 11 21 31 41 51
| | | | | |
1 EKDPNSNENG SKIRSLVKMG FSELEASLAV ERCGENVDIA ELTDFLCAAQ MAREFSEFYT 60
61 EHEEQKPRHN IKKRRFESKG EPRSSVDDEP IRLPNPMIGF GVPNEPGLIT HRSLPELARG 120
121 PPFFYYENVA LTPKGVWETI SRHLFEIPPE FVDSKYFCVA ARKRGYIHNL PINNRFQIQP 180
181 PPKYTIHDAF PLSKRWWPEW DKRTKLNCIL TCTGSAQLTN RIRVALEPYN EEPEPPKHVQ 240
241 RYVIDQCKKW NLVWVGKNKA APLEPDEMES ILGFPKNHTR GGGMSRTERF KSLGNSFQVD 300
301 TVAYHLSVLK PI
|
| Detection Method: | |
| Confidence: | 34.045757 |
| Match: | 10mhA |
| Description: | DNA methylase HhaI |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [498-626] |
1 11 21 31 41 51
| | | | | |
1 FPHGINVLSL FTGIGGGEVA LHRLQIKMKL VVSVEISKVN RNILKDFWEQ TNQTGELIEF 60
61 SDIQHLTNDT IEGLMEKYGG FDLVIGGSPC NNLAGGNRVS RVGLEGDQSS LFFEYCRILE 120
121 VVRARMRGS
|
| Detection Method: | |
| Confidence: | 20.69897 |
| Match: | 1g55A |
| Description: | DNMT2 |
Matching Structure (courtesy of the PDB): |
|
