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View Structure Prediction Details

Protein: gi|53791995, gi|...
Organism: Oryza sativa Japonica Group
Length: 642 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|53791995, gi|....

Description E-value Query
Range
Subject
Range
TMN7_ARATH - Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana GN=TMN7 PE=2 SV=1
849.0 [0..34] [642..27]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIAGGTGCR RGLLLPPLLF AAALLLSAAS PARAFYLPGV APRDFQKDDE LQVKVNKLSS  60
   61 TKTQLPYDYY FLDYCKPEAI KNSAENLGEV LRGDRIENSV YNFKMRRDET CKVVCRSKLS 120
  121 PEAAKNFKEK IDDEYRVNMI LDNLPVVVPR QTREGSQTPS FEHGYRVGYK LKDDKYYINN 180
  181 HLSFKVLYHE DPNSPDARIV GFHVIPSSIK HEYSAWDDKN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [221-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTVQTCNANN KITPGSHTPQ DVVPEAYVVF SYDVTFEASE IIWASRWDVY LLSSDSQIHW  60
   61 FSIINSLMIV LFLSGMVAMI MMRTLYKDIA NYNQLDNQDE AQEETGWKLV HGDVFRPPVH 120
  121 SGLLCVYVGT GVQFFGMTLV TMMFALLGFL SPANR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [376-494]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGLMTAMVLL WVFMGVLAGY TSSRLYKMFK GTEWKKITLK TAFMFPGIIF ALFFFLNALI  60
   61 WGEKSSGAVP FGTMFALFLL WFGISVPLVF VGSFLGFKQP AIEDPVKTNK IPRQIPEQA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [495-642]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WYLQPAFSIL AGGILPFGAV FIELFFILTS IWLNQFYYIF GFLFIVFIIL IVTCAEITIV  60
   61 LCYFQLCSED YHWWWRAYLT AGSSALYLFA YAIFYFFNKL EITKLVSGIL YFGYMLIISY 120
  121 AFFVLTGTIG FYACFWFVRK IYASVKID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle