| Protein: | gi|115469828, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 317 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115469828, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
326.0 | [0..1] | [308..1] |
|
|
323.0 | [0..1] | [317..1] |
|
|
291.0 | [0..1] | [316..1] |
|
|
289.0 | [0..1] | [306..1] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MGKASKDKRD IYYRKAKEEG WRARSAFKLL QIDQEFNIFH GVKRVVDLCA APGSWSQVLS 60
61 RNLYVPAKQS PDCKEGDLPL IVAIDLQPMA PIEGVIQVQG DITNARTAEV VIRHFDGCKA 120
121 DLVVCDGAPD VTGLHDMDEF VQSQLILAAL TIVTHVLKVG GKFVAKIFRG KDTSLLYCQL 180
181 KLFFSQVTFA KPKSSRNSSI EAFAVCENY
|
| Detection Method: |  |
| Confidence: | 49.09691 |
| Match: | 1eizA |
| Description: | RNA methyltransferase FtsJ |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [210-317] |
1 11 21 31 41 51
| | | | | |
1 SPPEGFKEKD LYHLLEKVGT PSGADDLDCR SGWLEGPNKV YIPFLACGDL SGYDSDRSYP 60
61 LTSTEGGSYQ SLDPVQPPIA PPYKTALEMK KVASHGIGAD ISKLSLDS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.475 | a.118.8 | TPR-like |
| View | Download | 0.475 | a.118.8 | TPR-like |
| View | Download | 0.384 | a.29.2 | Bromodomain |
| View | Download | 0.375 | d.354.1 | Description not found. |
| View | Download | 0.370 | a.29.2 | Bromodomain |
| View | Download | 0.317 | c.114.1 | YchN-like |
| View | Download | 0.303 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.301 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.262 | a.21.1 | HMG-box |
| View | Download | 0.239 | a.4.5 | "Winged helix" DNA-binding domain |
