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View Structure Prediction Details

Protein: gi|52077496, gi|...
Organism: Oryza sativa Japonica Group
Length: 569 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52077496, gi|....

Description E-value Query
Range
Subject
Range
gi|8777441 - gi|8777441|dbj|BAA97031.1| unnamed protein product [Arabidopsis thaliana]
414.0 [0..51] [533..1]

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Predicted Domain #1
Region A:
Residues: [1-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLRPLNTER SFLLSSPKPH SPRDACSPPV RSPSSTRLLA CRKLPSSSKP MATGAGVLER  60
   61 SLSFKNWEPT AAEEAAVAAP PPHDEAASRC INGARPGILL LQQSPKAKQG DAATSPAQAA 120
  121 LIEFISPKPR SELDQAATKV QKLFKGHRTR RNLADCAIVV EELWWKAYDS ACLNIKSISF 180
  181 FDEAKQETAA SRWSRAGKRI AKVGKGLSKN EKAQKLALQH WLEAIDPRHR YGHNLHLYYD 240
  241 IWSASSSTEP FFYWLDVGAG RDMHHQKCPR SKLYSQLIMY LGPNEREAFE VVVEGGKLMY 300
  301 RKSGVLVNTT EDSKWIFVLS TTRSLYVGQK KKGKFQHSSF LAGAATTAAG RLVAKDGVLQ 360
  361 AIWPYSGHYL PTEENFREFI SFLEENSVDL ADVKRCSVDD DEFPSFKKTE EKPEEAEKPT 420
  421 EPTHDEIMDS SQIELPEVDI VKEAVVENSE DTKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.221849
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [455-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APIMASRPSF KWATANGARI GCVRDYPADL QSMALEHVNL SPRVVPSPTT NRLPIPSPRP  60
   61 SPKIRLSPRL HYMGLPTPTG CKLPIPSPEI RRSPRDQFMG FQTPSVSLTL PKLGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle