| Protein: | gi|52077380 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 577 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52077380.
| Description | E-value | Query Range |
Subject Range |
|
|
390.0 | [0..1] | [559..1] |
|
Region A: Residues: [1-317] |
1 11 21 31 41 51
| | | | | |
1 MGPGTWRKAY GALKDSTKVG LANFNSEYKD LDIAIVKATN HVECPPKERY LRKILFATSA 60
61 NRPRSDVGYS ICTLARRLSK TKNWIVALKT LIVIHRLLRE GDGTFKEDFL NYSYRGTILQ 120
121 IPQFKDDSSP LAWDCSVWVR TYASYLDERV ECFRILKYDV EADRLVKLPQ ASGKAHSRTR 180
181 TLPCGDLLDH LPALQRLLLR LISCQPEGAA CTNYLVQYAL ALVLKESFKI YCSINDGIIN 240
241 LVDMYFDMQK YDAIKALEIY KRAGYQAEKL SAFYEHCKRL ELARTFQFPT LRQPPPSFLI 300
301 TMEEYIREAP RVSIASK
|
| Detection Method: |  |
| Confidence: | 84.39794 |
| Match: | 1hf8A |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.229007340928547 | bayes_pls_golite062009 |
|
Region A: Residues: [318-464] |
1 11 21 31 41 51
| | | | | |
1 SLESEEQNSP SDNEDEAPQE TEKPVDEEEQ EPSEPEEEPQ PTAESVEGTE PVPLATTGDL 60
61 LNFDEEVNPL IANIEESNAL ALAIVAPGNE NKASASQDLF ALDKSGWELA LVTAPSTHTS 120
121 RPVDNQLAGG FDKLLLDSLY EDEARRQ
|
| Detection Method: | |
| Confidence: | 0.95 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [465-577] |
1 11 21 31 41 51
| | | | | |
1 QIASATYNGS VAGNPFDPND PFAMSNNFAP PSNVQLAMMQ QQHQDYQEQQ QQYYQIQQQQ 60
61 QMVTLPPQTY HQQQQTQYSA LPSHDGLSNP FGDPFGGLVA MANPPKQNNS NLV
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
