| Protein: | gi|52075936, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 315 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52075936, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
373.0 | [0..38] | [314..75] |
|
|
354.0 | [0..1] | [311..1] |
|
|
294.0 | [0..1] | [314..23] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MAGFPLGGGS HSRDNPAPPV PPVHPADAAS FLYATRGGSF QLWQQQEQQP FYASNIIRFA 60
61 DDAPPAPSLA GASSSSSSRG MRSSGGGGGG G
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.559 | a.77.1 | DEATH domain |
| View | Download | 0.451 | a.77.1 | DEATH domain |
| View | Download | 0.451 | a.77.1 | DEATH domain |
| View | Download | 0.398 | a.77.1 | DEATH domain |
| View | Download | 0.398 | a.77.1 | DEATH domain |
| View | Download | 0.378 | a.77.1 | DEATH domain |
| View | Download | 0.318 | a.190.1 | Description not found. |
| View | Download | 0.270 | a.2.4 | Theta subunit of DNA polymerase III |
| View | Download | 0.244 | a.134.1 | Fungal elicitin |
|
Region A: Residues: [92-191] |
1 11 21 31 41 51
| | | | | |
1 GGGISCQDCG NQAKKDCTHM RCRTCCKSRG FACATHVKST WVPAAKRRER QQQLAALAAS 60
61 AAATAGGAGP SRDPTKRPRA RPSATTPTTS SGDQQMVTVA
|
| Detection Method: | |
| Confidence: | 0.998 |
| Match: | 1pyiA |
| Description: | PPR1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [192-315] |
1 11 21 31 41 51
| | | | | |
1 ERFPREVSSE AVFRCVRLGP VDQAEAEVAY QTAVSIGGHV FKGILHDVGP EALAVAGGGG 60
61 ASEYHFRLTG DGSSPSTAAA GEAGSGGGGN IIVSSAVVMD PYPTPGPYGA FPAGTPFFHG 120
121 HPRP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.523 | b.7.1 | C2 domain (Calcium/lipid-binding domain, CaLB) |
| View | Download | 0.263 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.263 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.244 | d.190.1 | Chorismate lyase |
| View | Download | 0.234 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.212 | d.218.1 | Nucleotidyltransferase |
