| Protein: | gi|52076505, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 358 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52076505, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
491.0 | [0..29] | [358..22] |
|
|
480.0 | [0..29] | [358..23] |
|
|
469.0 | [0..1] | [354..1] |
|
|
469.0 | [0..15] | [356..3] |
|
|
468.0 | [0..8] | [356..3] |
|
|
465.0 | [0..2] | [342..4] |
|
Region A: Residues: [1-157] |
1 11 21 31 41 51
| | | | | |
1 MNNHAAGGST SNGGSGVDGD GGGGGGAARR NTKMPKYSKF TQQELPACKP ILTPKWVVSV 60
61 FFLVGVIFVP VGVVSLLAAQ NVVEIVDRYD DACVPANMTD NKLAYIQNPN ISKECTRTLT 120
121 ITEDMNQPIF VYYQLDNFYQ NHRRYVKSRN DGQLRDA
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.802 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.772 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.758 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.757 | N/A | N/A | d.24.1 | Pili subunits |
| View | Download | 0.753 | N/A | N/A | d.24.1 | Pili subunits |
| View | Download | 0.733 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.663 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.644 | N/A | N/A | d.24.1 | Pili subunits |
| View | Download | 0.633 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.610 | N/A | N/A | d.9.2 | Description not found. |
|
Region A: Residues: [158-216] |
1 11 21 31 41 51
| | | | | |
1 AKANQTSACE PEKTTADGKP IVPCGLIAWS LFNDTYSFTR GNENLTVDKK DISWKSDRE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.753 | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.737 | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.731 | g.44.1 | RING/U-box |
| View | Download | 0.718 | g.44.1 | RING/U-box |
| View | Download | 0.718 | g.44.1 | RING/U-box |
| View | Download | 0.718 | b.34.9 | Tudor/PWWP/MBT |
| View | Download | 0.661 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.592 | g.59.1 | Zinc-binding domain of translation initiation factor 2 beta |
| View | Download | 0.531 | d.169.1 | C-type lectin-like |
| View | Download | 0.484 | b.40.4 | Nucleic acid-binding proteins |
|
Region A: Residues: [217-358] |
1 11 21 31 41 51
| | | | | |
1 HKFGKNVYPS NFQNGLLKGG GTLDPAIPLS EQEDLIVWMR TAALPTFRKL YGRIYVDLKK 60
61 NDTITVKLSN NYNTYNFGGK KKLVLSTATW LGGKNDFLGF AYVIVGGVCF FLAFAFTLLY 120
121 LIKPRKLGDH NYLSWNRHPG GR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.544 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.544 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.521 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.483 | N/A | N/A | d.209.1 | LCCL domain |
| View | Download | 0.444 | N/A | N/A | a.118.14 | FliG |
| View | Download | 0.427 | N/A | N/A | d.169.1 | C-type lectin-like |
| View | Download | 0.377 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.337 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.302 | N/A | N/A | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.286 | N/A | N/A | d.150.1 | 4'-phosphopantetheinyl transferase |
