| Protein: | gi|113595759, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 263 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113595759, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
322.0 | [0..12] | [263..11] |
|
|
312.0 | [0..9] | [263..5] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MRLPASSSSA AGLQERIWDL HDNLSHAILS LSASAHRCCR RRAPEGRVVV KGWRRQGGCG 60
61 DCGLEQEAAA AATMADARSL HAVRAALEDL EGHLHFL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.759 | d.64.2 | Description not found. |
| View | Download | 0.646 | d.64.2 | Description not found. |
| View | Download | 0.646 | d.64.2 | Description not found. |
| View | Download | 0.645 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.645 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.642 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.642 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.569 | d.58.49 | YajQ-like |
| View | Download | 0.558 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.540 | d.56.1 | GroEL-intermediate domain like |
|
Region A: Residues: [98-168] |
1 11 21 31 41 51
| | | | | |
1 HNIQLCQVAE RDAAIARLQQ SRILLATRLA EHRWKKHEVI EEALAFVDDA LDKSRFVSPE 60
61 DVRGTHTHSQ S
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.845 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.845 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.699 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.699 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.694 | N/A | N/A | a.101.1 | Uteroglobin-like |
| View | Download | 0.673 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.651 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.651 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.642 | N/A | N/A | a.4.1 | Homeodomain-like |
|
Region A: Residues: [169-263] |
1 11 21 31 41 51
| | | | | |
1 VENQCPKIHD SNFLVRFLSC TLAIAKNSLR FERIGGALGN TAMFAVSMLA FLQLQQVAFG 60
61 KQTPAVQCRR VNYFHSQMSV KNTKEKHLVV LLARG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.601 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.570 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.556 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.542 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.526 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.526 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.508 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.508 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.468 | a.180.1 | N-terminal, cytoplasmic domain of anti-sigmaE factor RseA |
