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View Structure Prediction Details

Protein: PPSP1_ARATH
Organism: Arabidopsis thaliana
Length: 295 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPSP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554074 - gi|21554074|gb|AAM63155.1| putative acid phosphatase [Arabidopsis thaliana]
224.0 [0..15] [295..13]

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Predicted Domain #1
Region A:
Residues: [1-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYNSNSNNN NNNIVVVFDF DKTIIDVDSD NWVIDELGFT DLFNQLLPTM PWNTLMDRMM  60
   61 KELHDQGKTI EEIKQVLRTI PIHPRVVPAI KSAHDLGCEL RIVSDANMFF IETIVEHLGI 120
  121 SELFSEINSN PGYVDERGTL KISPYHDFTK SPHSCSCGTC PPNMCKGLII ERIQQSLAKE 180
  181 GKKKMIYLGD GAGDYCPSLK LNTEDYVMPR KNFPVWDLIS QNPMLIKAAI REWTDGQSME 240
  241 MILIGTIEEI RLEEEKEKML TSAENNCKMQ TISIGINNVH HEPILPRALR VSQSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.69897
Match: 1iwoA
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle