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View Structure Prediction Details

Protein: gi|18395796, gi|...
Organism: Arabidopsis thaliana
Length: 148 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18395796, gi|....

Description E-value Query
Range
Subject
Range
gi|21593102 - gi|21593102|gb|AAM65051.1| unknown [Arabidopsis thaliana]
167.0 [0..1] [148..1]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESPRNHGGS EEEEYSSCES GWTMYIEDAF HGNDQSSVVV DDDDDDTQVK EADDGYENDD  60
   61 GDTSDDGGDE ESDDSMASDA SSGPSNQLPK HINKHAARKN GSKQVYLQKR QHTEKTISNE 120
  121 GEKSDLKART RTSAASRVQS RGKVSKTK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.338 a.1.1 Globin-like
View Download 0.286 a.39.1 EF-hand
View Download 0.286 a.39.1 EF-hand
View Download 0.247 a.24.3 Cytochromes
View Download 0.242 a.225.1 Description not found.
View Download 0.233 a.29.11 Description not found.
View Download 0.207 a.24.3 Cytochromes


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle