| Protein: | Y1390_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 272 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1390_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
384.0 | [0..9] | [272..4] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MSFEEEEEEE TFEHTLLVVR EVSVYKIPPR TTSGGYKCGE WLQSDKIWSG RLRVVSCKDR 60
61 CEIRLEDSNS GDLFAACFVD PGRRENSVEP SLDSSRYFVL RIDDGRGKYA FIGLGFAERN 120
121 EAFDFNVALS DHEKYVRREK EKETGETSES D
|
| Detection Method: |  |
| Confidence: | 68.522879 |
| Match: | 1tqzA |
| Description: | Solution structure of NECAP1 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.597587183571285 | bayes_pls_golite062009 |
| protein binding | 0.29116370406325 | bayes_pls_golite062009 |
|
Region A: Residues: [152-272] |
1 11 21 31 41 51
| | | | | |
1 NHIDIHPAVN HRLKEGETIR INVKPKPTTN GTGMLSAALS GTGKPKPLAL APPPKAAGVT 60
61 RSPLPPPPND PVASRIASDG CKESRRNEPL SDLSQLKKNL PSTAGSGSSK STGAASGWAA 120
121 F
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.279 | N/A | N/A | a.4.12 | TrpR-like |
