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View Structure Prediction Details

Protein: FOLK_ARATH
Organism: Arabidopsis thaliana
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FOLK_ARATH.

Description E-value Query
Range
Subject
Range
gi|8843778 - gi|8843778|dbj|BAA97326.1| unnamed protein product [Arabidopsis thaliana]
267.0 [0..1] [272..1]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTSTTTKL SVLCCSFISS PLVDSPPSLA FFSPIPRFLT VRIATSFRSS SRFPATKIRK  60
   61 SSLAAVMFPE NSVLSDV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.851 N/A N/A a.65.1 Annexin

Predicted Domain #2
Region A:
Residues: [78-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CAFGVTSIVA FSCLGFWGEI GKRGIFDQKL IRKLVHINIG LVFMLCWPLF SSGIQGALFA  60
   61 SLVPGLNIVR MLLLGLGVYH DEGTIKSMSR HGDRRELLKG PLYYVLSITS ACIYYWKSSP 120
  121 IAIAVICNLC AGDGMADIVG RRFGTEKLPY NKNKSFAGSI GMATAGFLAS VAYMYYFASF 180
  181 GYIEDSGGMI LRFLVISIAS ALVESLPIST DIDDNLTISL TSALAGFLLF 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 4.823909
Match: PF01148.11
Description: No description for PF01148.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle