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View Structure Prediction Details

Protein: ORTHL_ARATH
Organism: Arabidopsis thaliana
Length: 465 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORTHL_ARATH.

Description E-value Query
Range
Subject
Range
gi|63147378, gi|... - gi|63147378|gb|AAY34162.1| At4g08590 [Arabidopsis thaliana], gi|145332983|ref|NP_001078357.1| ORTHL ...
406.0 [0..1] [465..1]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRVNQLPCD CVSTAEESLT SGTCITPTHV TSLSSPLDRS GDVDPLPVSD ESGGSKADES  60
   61 MTDADETKKR KRILSGDCEA DENNKSDGEI ASLNDGVDAF TAICEDLNCS LCNQLPDRPV 120
  121 TILCGHNFCL KCFDKWIDQG NQICATCRST IPDKMAANPR VNSSLVSVIR YVKVAKTAGV 180
  181 GTANFFPFTS NQDGPENAFR TKRAKIGEEN AARIYVTVPF DHFGPIPAEH DPV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.69897
Match: 2cklB
Description: No description for 2cklB was found.

Predicted Domain #2
Region A:
Residues: [234-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNQGVLVGES WENRVECRQW GVHLPHVSCI AGQEDYGAQS VVISGGYKDD EDHGEWFLYT  60
   61 GRSRGRHFAN EDQEFEDLNE ALRVSCEMGY PVRVVRSYKD RYSAYAPKEG VRYDGVYRIE 120
  121 KCWRKARFPD SFKVCRYLFV RCDNEPAPWN SDESGDRPRP LPNIPELETA SDLFERKESP 180
  181 SWDFDEAEGR WRWMKPPPAN HEQRERMKMA MTCLLLFVLI ILVGSSSILY QY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle