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View Structure Prediction Details

Protein: REV7_ARATH
Organism: Arabidopsis thaliana
Length: 215 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for REV7_ARATH.

Description E-value Query
Range
Subject
Range
gi|222619003, gi... - gi|50948051|ref|XP_483553.1| putative mitotic arrest defective protein 2B [Oryza sativa (japonica cu...
205.0 [0..1] [203..1]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKDDNQSG EVGRTLVDFM EVAITMIVYL KGFYPSAAFE RRRYMNVVVQ RARHPELRDY  60
   61 IHSAASGLLP FIEKGLVERV AVVFFSEDNV PVERFIFKIT IKPSCAALVE EGQLEFALRS 120
  121 FLIKLSVSKS LVKPLPLNCR WEVTAYLRSL PQVGSSKEAE LWIPTDTKQW QNPPVLTPVK 180
  181 SLNSEPLCLQ LYLEHPSLSE PLNLVNPEDV APHDP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 1klqA
Description: The spindle assembly checkpoint protein mad2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.24288011094963 bayes_pls_golite062009
protein binding 0.600501436835008 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle