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View Structure Prediction Details

Protein: PHO14_ARATH
Organism: Arabidopsis thaliana
Length: 745 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHO14_ARATH.

Description E-value Query
Range
Subject
Range
gi|41079256 - gi|41079256|gb|AAR99485.1| PHO1-like protein [Arabidopsis thaliana]
590.0 [0..1] [744..1]

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Predicted Domain #1
Region A:
Residues: [1-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFGKEFVSQ MIPEWQEAYI DYAYLKTILQ DIQASRNRSD SNNQSSTPSF ARNLTRRYNR  60
   61 DALVSENHDI VVNTVTRLEE GLETAAYETT FLKAGEAGGD FEVTFFRTLD REFNKVNNFY 120
  121 RLKVETARTE ALALNKQMDA LIAFRHKVMD QNQKNPSVFD SVSEDINGSA SEVGSSSKCT 180
  181 EHNVALADLM RNEDTSNESI LERIRMNKTR EITPLSAIKT ILKVHKQDEL KFTRDNLKEV 240
  241 EKRLQVAFIE FYQKLRHLKN YSFLNASAVS KIMKKYDKIA KRNAAKLYME MVDKSFLSSS 300
  301 EEVHKLLLKV ESIFIEHFSN SNRREGMSHL RPKINKERHL ITFSTGFFFG CGISLIVALG 360
  361 LIIHARNIMG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.154902
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [371-546]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPGQRTYMET MFPLYRFFGF VVLHMDVYAA NIYFWRRYRV NYSFIFGFKQ GTELGYRHVL  60
   61 LLSFGLGTLS LCAVLLNLDM EMDAQTKDYR LVTELIPLFL LVLVIIIVLC PFNILYRSSR 120
  121 FFFLSVLFRC IAAPFYAVHL PDFFLGDQLT SQVQALRSLE FYICYYGFGD FRYRRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [547-745]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTCTSNIGFR TFYFIVAVIP YWLRFLQCIR RMVEDRDLSH GYNGIKYLLT IVAASLRTAY  60
   61 TLNRGSNWNI TAWVFSGVAT FYGTYWDIVL DWGLLQRGCK NSFLRDKLLV PHKTVYYAAM 120
  121 VLNVLLRLVW LQTVLDLKFS FLHRETMVAL MACLEIIRRG IWNFFRLENE HLNNVGRYRA 180
  181 FKTVPLPFNY EEDGDHHNN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 92.49485
Match: PF03124.5
Description: No description for PF03124.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle