| Protein: | PMT8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 623 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PMT8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
509.0 | [0..1] | [623..1] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MMRGRSDGGL KKRLIASVCV VALFVCFLFM YYGSSSQGAS ALEYGRSLRK LGSSYLSGDD 60
61 DNGDTKQDDS VANAEDSLVV AKSFPVCDDR HSEIIPCLDR NFIYQMRLKL DLSLMEHYER 120
121 HCPPPERRFN CLIPPPSGYK VPIKWP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [147-427] |
1 11 21 31 41 51
| | | | | |
1 KSRDEVWKAN IPHTHLAKEK SDQNWMVEKG EKISFPGGGT HFHYGADKYI ASIANMLNFS 60
61 NDVLNDEGRL RTVLDVGCGV ASFGAYLLAS DIMTMSLAPN DVHQNQIQFA LERGIPAYLG 120
121 VLGTKRLPYP SRSFEFAHCS RCRIDWLQRD GLLLLELDRV LRPGGYFAYS SPEAYAQDEE 180
181 NLKIWKEMSA LVERMCWRIA VKRNQTVVWQ KPLSNDCYLE REPGTQPPLC RSDADPDAVA 240
241 GVSMEACITP YSKHDHKTKG SGLAPWPARL TSSPPRLADF G
|
| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 1p91A |
| Description: | Crystal Structure of RlmA(I) enzyme: 23S rRNA n1-G745 methyltransferase (NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER19) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.723277178398499 | bayes_pls_golite062009 |
| transferase activity | 0.64512166557639 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.54403439349476 | bayes_pls_golite062009 |
| methyltransferase activity | 0.54389223881989 | bayes_pls_golite062009 |
|
Region A: Residues: [428-623] |
1 11 21 31 41 51
| | | | | |
1 YSTDMFEKDT ELWKQQVDSY WNLMSSKVKS NTVRNIMDMK AHMGSFAAAL KDKDVWVMNV 60
61 VSPDGPNTLK LIYDRGLIGT NHNWCEAFST YPRTYDLLHA WSIFSDIKSK GCSAEDLLIE 120
121 MDRILRPTGF VIIRDKQSVV ESIKKYLQAL HWETVASEKV NTSSELDQDS EDGENNVVFI 180
181 VQKKLWLTSE SLRDSE
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 2r3sA |
| Description: | No description for 2r3sA was found. |
