| Protein: | gi|115467264, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 436 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115467264, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
237.0 | [0..26] | [436..1] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MEALSRTERV GGGGGAMVEV AFASSAGSSA AAPRRLRGEL VVRDAIPYAG VAPPPPALPL 60
61 PQPQLQPQVQ ATTSGGGGGG KISPAVLFII VILAVVFFIS GLLHLLVRLL MKKQHRRGGG 120
121 GGAAAGVSRS AAGDDAGGGG DAALQRQLQQ LFHLHDSGLD QAFIDALPVF AYREIVVGGG 180
181 GD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [183-239] |
1 11 21 31 41 51
| | | | | |
1 GDKEPFDCAV CLCEFDAEDR LRLLPLCGHA FHLHCIDTWL LSNSTCPLCR GVLFVPG
|
| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 1iymA |
| Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [240-436] |
1 11 21 31 41 51
| | | | | |
1 LTENNPMFDF DEGLEEGRLS EDCDNGFGYP GHKATEGMQT PGTEKRVFPV RLGKFKNVGT 60
61 QGAVEGGGIG NANGAVLRRE EGESSSSSLD ARRCFSMGTY QYVLGTSELR VSLQPDRIRN 120
121 GGGGVTRARP TGLSSVNAEI MEGKKICARN KGESFSVSKI WQWSNLKGKL PTGSDECSEA 180
181 GSLPWMKRGG IGDTSNM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
