| Protein: | SPS1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 406 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPS1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
382.0 | [0..1] | [406..1] |
|
|
340.0 | [0..1] | [406..2] |
|
|
340.0 | [0..1] | [405..2] |
|
|
326.0 | [0..72] | [406..1] |
|
|
323.0 | [0..82] | [404..59] |
|
|
322.0 | [0..74] | [404..1] |
|
|
321.0 | [0..1] | [406..2] |
|
|
320.0 | [0..82] | [404..1] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MMTSCRNIDL GTMMMACGCG RRQFPSLAKT VCKFTSSNRS YGGLVGSCKA VPTKSKEISL 60
61 LNGIGQSQTV SFDLKQESKQ P
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.883 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.883 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.678 | a.248.1 | Description not found. |
| View | Download | 0.661 | a.8.11 | Description not found. |
| View | Download | 0.658 | a.74.1 | Cyclin-like |
| View | Download | 0.658 | a.74.1 | Cyclin-like |
| View | Download | 0.583 | a.48.4 | Description not found. |
| View | Download | 0.532 | a.65.1 | Annexin |
| View | Download | 0.529 | a.77.1 | DEATH domain |
| View | Download | 0.527 | a.83.1 | Guanido kinase N-terminal domain |
| View | Download | 0.527 | a.83.1 | Guanido kinase N-terminal domain |
| View | Download | 0.306 | a.74.1 | Cyclin-like |
| View | Download | 0.294 | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.286 | a.59.1 | PAH2 domain |
|
Region A: Residues: [82-406] |
1 11 21 31 41 51
| | | | | |
1 ISLVTLFELV AVDLQTLNDN LLSIVGAENP VLISAAEQIF GAGGKRMRPG LVFLVSHATA 60
61 ELAGLKELTT EHRRLAEIIE MIHTASLIHD DVLDESDMRR GKETVHELFG TRVAVLAGDF 120
121 MFAQASWYLA NLENLEVIKL ISQVIKDFAS GEIKQASSLF DCDTKLDEYL LKSFYKTASL 180
181 VAASTKGAAI FSRVEPDVTE QMYEFGKNLG LSFQIVDDIL DFTQSTEQLG KPAGSDLAKG 240
241 NLTAPVIFAL EREPRLREII ESEFCEAGSL EEAIEAVTKG GGIKRAQELA REKADDAIKN 300
301 LQCLPRSGFR SALEDMVLYN LERID
|
| Detection Method: | |
| Confidence: | 81.69897 |
| Match: | 1wy0A |
| Description: | Crystal structure of geranylgeranyl pyrophosphate synthetase from Pyrococcus horikoshii Ot3 |
Matching Structure (courtesy of the PDB): |
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