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View Structure Prediction Details

Protein: gi|222635540, gi...
Organism: Oryza sativa Japonica Group
Length: 486 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222635540, gi....

Description E-value Query
Range
Subject
Range
gi|51090867, gi|... - gi|51090867|dbj|BAD35415.1| hydrolase-like [Oryza sativa Japonica Group], gi|215697178|dbj|BAG91172....
301.0 [0..1] [419..1]

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Predicted Domain #1
Region A:
Residues: [1-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVVSSSHSC LAFNRTPSSA WRFPGNGLGP GHAKLTRPRS AILCVRSGTA SNPADSGKVH  60
   61 ASHGFYVSDV DAALQGIPKK VGEIEKMIIP SLPEGPESSL ISTGFWEWKP KLSVYYEKSG 120
  121 IDNSKAPSVL FLPGFGVGTF HFEKQLKDLG RDYKVWTMDF LGQGMSLPCE DPAPKSTSGE 180
  181 LDEDTYWGFG QELQPWAEEL VYSIDLWRDQ VQHFIEEVIG EPVYIVGNSL GGFVSLYLAA 240
  241 SCPHLVKGVT LLNATPFWGF LPNPATSPRL SKIFPWAGTF PLPSFVRKLT ETVWQKISDP 300
  301 RSIQGILKQV YADHSTNVDM VFSRIIETTQ HPAAAASFAS IMCAPKGQIS FEEALSRCQR 360
  361 QGIPISLMYG REDPWVRPIW GIKVKQQVPE SPYYEISPAG HCPHDEVPEV INYLLRGWLK 420
  421 NVESEGSVAV PFLEEPSYAE NGVSRELEFV RGGSKKSVHV RLFGSKISLW SQLRSLLKSN 480
  481 TWVISR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.522879
Match: 1s8oA
Description: Human soluble Epoxide Hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle