| Protein: | gi|255678742, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1214 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for gi|255678742, gi....
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Region A: Residues: [1-659] |
1 11 21 31 41 51
| | | | | |
1 MAASPPFMAA AAFLTLVVVL FRAPAPAIAV GEEAAALLAF RRASVADDPD GALASWVLGA 60
61 GGANSTAPCS WDGVSCAPPP DGRVAAVDLS GMSLAGELRL DALLALPALQ RLNLRGNAFY 120
121 GNLSHAAPSP PCALVEVDIS SNALNGTLPP SFLAPCGVLR SVNLSRNGLA GGGFPFAPSL 180
181 RSLDLSRNRL ADAGLLNYSF AGCHGVGYLN LSANLFAGRL PELAACSAVT TLDVSWNHMS 240
241 GGLPPGLVAT APANLTYLNI AGNNFTGDVS GYDFGGCANL TVLDWSYNGL SSTRLPPGLI 300
301 NCRRLETLEM SGNKLLSGAL PTFLVGFSSL RRLALAGNEF TGAIPVELGQ LCGRIVELDL 360
361 SSNRLVGALP ASFAKCKSLE VLDLGGNQLA GDFVASVVST IASLRELRLS FNNITGVNPL 420
421 PVLAAGCPLL EVIDLGSNEL DGEIMPDLCS SLPSLRKLLL PNNYLNGTVP PSLGDCANLE 480
481 SIDLSFNLLV GKIPTEIIRL PKIVDLVMWA NGLSGEIPDV LCSNGTTLET LVISYNNFTG 540
541 SIPRSITKCV NLIWVSLSGN RLTGSVPGGF GKLQKLAILQ LNKNLLSGHV PAELGSCNNL 600
601 IWLDLNSNSF TGTIPPQLAG QAGLVPGGIV SGKQFAFLRN EAGNICPGAG VLFEFFGIR
|
| Detection Method: |  |
| Confidence: | 54.39794 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [660-886] |
1 11 21 31 41 51
| | | | | |
1 PERLAEFPAV HLCPSTRIYT GTTVYTFTNN GSMIFLDLSY NGLTGTIPGS LGNMMYLQVL 60
61 NLGHNELNGT IPDAFQNLKS IGALDLSNNQ LSGGIPPGLG GLNFLADFDV SNNNLTGPIP 120
121 SSGQLTTFPP SRYDNNNGLC GIPLPPCGHN PPWGGRPRGS PDGKRKVIGA SILVGVALSV 180
181 LILLLLLVTL CKLRMNQKTE EVRTGYVESL PTSGTSSWKL SGVREPL
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| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [887-1214] |
1 11 21 31 41 51
| | | | | |
1 SINVATFEKP LRKLTFAHLL EATNGFSAET LIGSGGFGEV YKAKLKDGSV VAIKKLIHFT 60
61 GQGDREFTAE METIGKIKHR NLVPLLGYCK IGDERLLVYE YMKHGSLDVV LHDKAKASVK 120
121 LDWSARKKIA IGSARGLAFL HHSCIPHIIH RDMKSSNVLL DNNLDARVSD FGMARLMNAL 180
181 DTHLSVSTLA GTPGYVPPEY YQSFRCTTKG DVYSYGVVLL ELLSGKKPID PTEFGDNNLV 240
241 GWVKQMVKEN RSSEIFDPTL TDRKSGEAEL YQYLKIACEC LDDRPNRRPT MIQVMAMFKE 300
301 LQLDSDSDIL DGFSINSSTI DESGEKSM
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| Detection Method: | |
| Confidence: | 62.0 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
