| Protein: | MGDG1_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 535 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MGDG1_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
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283.0 | [0..52] | [535..56] |
|
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266.0 | [0..57] | [535..57] |
|
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255.0 | [0..56] | [535..50] |
|
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246.0 | [0..69] | [530..80] |
|
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243.0 | [0..43] | [532..52] |
|
|
240.0 | [0..57] | [535..44] |
|
|
233.0 | [0..140] | [525..1] |
|
|
229.0 | [0..143] | [527..2] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MPAPTASSLA AAADPALPAA FLSLPSPLLP ASPPLPAAPA PSSNAFCVPR GPARAVAVSV 60
61 SVSAYGAGST AAASRLHRMW AEFSRFVRLH GNQIAPLGFA SLGLGVGGGG GGSGEGAGGG 120
121 GGGGGGEVDG LVEEEGVARA EAP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.701 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.647 | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.625 | a.118.8 | TPR-like |
| View | Download | 0.608 | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.605 | a.1.1 | Globin-like |
| View | Download | 0.594 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.555 | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.546 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
|
Region A: Residues: [144-535] |
1 11 21 31 41 51
| | | | | |
1 KKVLILMSDT GGGHRASAEA IKAAFIQEFG DDYQVFVTDL WTDHTPWPFN QLPRSYSFLV 60
61 KHGPLWKMTY YGTAPRVVHQ PHFAATSTFI AREVAKGLMK YQPDVIISVH PLMQHVPLRI 120
121 LRSKGLLDKI PFTTVVTDLS TCHPTWFHKL VTRCYCPSAE VSKRALKAGL QPSQIKVYGL 180
181 PVRPSFVKPI RPEDELRREL GMDEYLPAVL LMGGGEGMGP IEATARALGD ALYDEVLGEP 240
241 TGQILVICGR NKKLTSRLQS INWKVPVQVK GFVTKMEECM GACDCIITKA GPGTIAEAMI 300
301 RGLPIILNGY IAGQEAGNVP YVVDNGCGKF SKSPEQIAKI VADWFGPRSD ELKMMSQNAL 360
361 KLARPDAVFK IVHDLHELVR QKCFVPQYAC AS
|
| Detection Method: | |
| Confidence: | 46.69897 |
| Match: | 1o6cA |
| Description: | Crystal structure of UDP-N-acetylglucosamine 2-epimerase |
Matching Structure (courtesy of the PDB): |
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