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View Structure Prediction Details

Protein: gi|115468794, gi...
Organism: Oryza sativa Japonica Group
Length: 519 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115468794, gi....

Description E-value Query
Range
Subject
Range
gi|32172502 - gi|32172502|gb|AAP74371.1| FAE1 [Marchantia polymorpha]
512.0 [0..3] [516..15]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METSAAAAPN GGAAAAEQQQ RRRLPDFQQS VRLKYVKLGY HYLISHGMYL LLSPLMALVA  60
   61 VQLSTVSPGD IADLWEQLRF NLLSVVACST LLVFLSTLYF LTRP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-519]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPVYLLDFAC YKPDPQRKCT RETFMRCSSL TGSFTDANLD FQRKILERSG LGEDTYLPPA  60
   61 VLRVPPNPCM DEARKEARTV MFGAIDQLLE KTGVKPKDIG VVVVNCSLFN PTPSLSAMVV 120
  121 NHYKLRGNVI SYNLGGMGCS AGLLSVDLAK DLLQVHPNSY ALVVSMENIT LNWYFGNNRS 180
  181 MLVSNCLFRM GGAAILLSNR RSDRRRSKYE LVHTVRTHKG ANDKCFGCVT QEEDEIGKIG 240
  241 VSLSKDLMAV AGDALKTNIT TLGPLVLPLS EQLLFMATLV AKKVLKMKIK PYIPDFKLAF 300
  301 EHFCIHAGGR AVLDELEKNL ELTDWHMEPS RMTLYRFGNT SSSSLWYELA YTEAKGRIRK 360
  361 RDRIWQIAFG SGFKCNSAVW KALQTVNPAK EKNPWMDEID NFPVEVPKIS KVGNA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.69897
Match: 1i8bA
Description: Chalcone synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.14505178497871 bayes_pls_golite062009
transferase activity 1.38158753865981 bayes_pls_golite062009
transferase activity, transferring acyl groups 1.12155569250025 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.03445196061197 bayes_pls_golite062009
acyltransferase activity 0.919789551144134 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] synthase activity 0.115776595790057 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle