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View Structure Prediction Details

Protein: DPHS1_ARATH
Organism: Arabidopsis thaliana
Length: 929 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for DPHS1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPEKKRDQ PFSQEKDEEK DLYLVHDEHE SPLPLTVTSR VLYMLGDIAS GPAYRFTQWL  60
   61 DLVRKRSATY GSSGFPHRLH RIDDMVTSAG ERNTDPKSPP SRQSSEISLW ERLGKASTVD 120
  121 IDSSCFSWNM LSSLHHTEHS SSTDHSEEDQ SKPLEVTVNS GGVVFFALFN SSSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [175-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDASRKEEAA VIKFASSRMA TQSERLGYEF SKWLGVQIPQ ARVIHSCNPE WTLIKEATEK  60
   61 AQAKATSEGD EVGEMTCSEL LEALELSRCL LLMSYVHGCP MLESMSSFET EEKAERAAAA 120
  121 LGRILVLDLV IRNEDRLPCR QLRWRGNPAN LLLTDRIVSS AKHHECSFDE AFDSAIKRYH 180
  181 PKDYRSIQRE RRASSVDSRS RLSISDQMLV SQASDFSDIT ESPRSYDTGL M

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.69897
Match: 1cjaA
Description: Actin-fragmin kinase, catalytic domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [406-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPMSDRSVAA DFHLVAIDSG VPRRPPAGKR ASDQEIYPRL VELLLNSSQY SSNLLHEITE  60
   61 GSLGYPQAED GEETSNVRSV VTPVVREFRN GFRAGLRDLQ EFHIFLVTLH QKLDVLLRAF 120
  121 FSMMDKTMCA DFDREDFAVP ESPSHTHGHE VNH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [559-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPSPSKDRVP SDNSSDHSES DMQKSVPRTP NSENKEDGSS PKSRESWHGR SGKGGESLSS  60
   61 QRLAAKLRDF HKFAKVDAES NKELDQWNET LRNEVMKLCQ ENGFNTGFFE GSDNNSCTDA 120
  121 YELKVRLEHI LERISLISKA AN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.0
Match: 2vswA
Description: No description for 2vswA was found.

Predicted Domain #5
Region A:
Residues: [701-857]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEKPSMIQEN LFIGGGLAAR SIYTLQHLGI THVLCLCANE IGQSDTQYPD LFEYQNFSIT  60
   61 DDEDSNIESI FQEALDFIKH GEETGGKILV HCFEGRSRSA TVVLAYLMLQ KKLTLLEAWS 120
  121 KLRKVHRRAQ PNDGFARILI NLDKKCHGKV SMEWRQR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.045757
Match: 1vhrA
Description: VH1-related dual-specificity phosphatase, VHR
Matching Structure (courtesy of the PDB):

Predicted Domain #6
Region A:
Residues: [858-929]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPTMKVCPVC GKNAGLSSSS LKLHLQKSHR KLSSGSVDSA MNMEIQKALE ALKLSTGRGS  60
   61 SASSNSFQSH PG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.39794
Match: 2g6zA
Description: No description for 2g6zA was found.

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