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View Structure Prediction Details

Protein: TYOBP_MACMU
Organism: Macaca mulatta
Length: 113 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TYOBP_MACMU.

Description E-value Query
Range
Subject
Range
TYOBP_PANTR - TYRO protein tyrosine kinase-binding protein OS=Pan troglodytes GN=TYROBP PE=3 SV=1
136.0 [0..1] [113..1]
TYOBP_MOUSE - TYRO protein tyrosine kinase-binding protein OS=Mus musculus GN=Tyrobp PE=1 SV=1
136.0 [0..1] [113..1]
TYROBP - TYRO protein tyrosine kinase binding protein
gi|123980378, gi... - gi|61360843|gb|AAX41937.1| TYRO protein tyrosine kinase binding protein [synthetic construct], gi|61...
136.0 [0..1] [113..1]
TYOBP_RAT - TYRO protein tyrosine kinase-binding protein OS=Rattus norvegicus GN=Tyrobp PE=3 SV=1
135.0 [0..1] [113..1]
CD3D_PIG - T-cell surface glycoprotein CD3 delta chain OS=Sus scrofa GN=CD3D PE=2 SV=1
132.0 [0..25] [113..86]
gi|16945316, gi|... - gi|41386800|ref|NP_777052.1| TYRO protein tyrosine kinase binding protein [Bos taurus], gi|16945316|...
132.0 [0..1] [113..1]
gi|3450968 - gi|3450968|gb|AAC32617.1| T-cell surface glycoprotein CD3 gamma chain [Marmota monax]
131.0 [0..21] [113..56]

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Predicted Domain #1
Region A:
Residues: [1-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGLEPCSRL LLLPLLLAVG GLRPVQAQAQ SDCSCSTVSP GVLAGIVLGD LVLTVLIALA  60
   61 VYFLGRLVPR GRGAAEAATR KQRITETESP YQELQGQRSD VYSDLNTQRP YYK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.502 a.24.22 Description not found.
View Download 0.392 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.392 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.352 a.24.9 alpha-catenin/vinculin
View Download 0.347 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.347 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.313 a.4.13 Sigma3 and sigma4 domains of RNA polymerase sigma factors
View Download 0.277 f.14.1 Voltage-gated potassium channels
View Download 0.272 a.24.17 Group V grass pollen allergen
View Download 0.270 a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain


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