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View Structure Prediction Details

Protein: SMO22_ARATH
Organism: Arabidopsis thaliana
Length: 266 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMO22_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592871 - gi|21592871|gb|AAM64821.1| putative C-4 sterol methyl oxidase [Arabidopsis thaliana]
215.0 [0..1] [266..1]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN  60
   61 TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSSFPLPSWK EVSAQILFYF IIEDFVFYWG HRILHSKWLY KNVHSVHHEY ATPFGLTSEY  60
   61 AHPAEILFLG FATIVGPALT GPHLITLWLW MVLRVLETVE AHCGYHFPWS LSNFLPLYGG 120
  121 ADFHDYHHRL LYTKSGNYSS TFVYMDWIFG TDKGYRRLKT LKENGDMKQT 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.124939
Match: PF04116.4
Description: No description for PF04116.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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